PERDIX

Submission Page

Please enter the e-mail address to which results should be sent:

Please select a pre-defined example structure:

OR enter your own structure CAD file (in PLY, IGES/IGS or GEO format):

Optional Input 1: Select the minimum edge length of your structure:

Optional Input 2: Select the mesh density of your structure (used in boundary design mode, from 0 for fine meshing up to 1 for coarse meshing):

Optional Input 3: Enter your scaffold sequence (as one line in a TXT file). Please ensure that it is of sufficient length to synthesize your design. If left blank, the default scaffolds M13mp18 will be used for lengths less than or equal to 7,249 nt; lambda phage will be used for lengths up to 48,502 nt; and a random sequence otherwise:

Output Options

Would you like atomic models in PDB file format and image file format included in your results? (These may increase processing time. Note that PDB files will not be generated for objects consisting of more than 7,249 nucleotides.)